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PDBsum entry 4uke
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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4uke calculated with MOLE 2.0 PDB id
4uke
Tunnels calculated on whole structure Tunnels calculated excluding ligands
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44 tunnels, coloured by tunnel radius 38 tunnels, coloured by tunnel radius 38 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 2.18 27.7 1.23 0.49 13.4 87 3 0 0 10 0 0 0  UNK 122 C
2 1.55 1.67 17.2 -1.89 -0.50 21.5 80 3 1 2 3 1 0 0  
3 1.41 1.58 18.2 -2.63 -0.48 38.1 86 4 2 1 3 0 0 0  
4 1.50 1.67 19.4 -2.12 -0.37 26.7 80 6 1 1 3 1 0 0  
5 1.45 1.59 21.0 -2.10 -0.52 27.5 90 4 2 2 4 0 0 0  
6 1.18 1.72 22.2 -2.05 -0.37 14.4 79 2 1 5 1 2 0 0  
7 2.13 2.43 20.5 -2.14 -0.55 21.5 82 4 0 1 2 0 0 0  OHX 101 d
8 1.26 1.34 30.4 -0.40 0.07 13.9 81 4 0 1 5 1 1 0  
9 1.17 1.17 16.2 -1.00 -0.60 13.3 88 3 0 0 1 0 0 0  
10 1.89 2.14 17.4 -0.98 -0.30 19.8 83 4 0 0 3 0 0 0  
11 1.58 1.58 15.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 58 C UNK 79 C UNK 82 C UNK 83 C UNK 105 C UNK
106 C UNK 136 C UNK 137 C UNK 139 C UNK 140 C UNK
142 C UNK 143 C
12 1.59 1.59 15.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 58 C UNK 79 C UNK 82 C UNK 83 C UNK 103 C UNK
104 C UNK 105 C UNK 106 C UNK 136 C UNK 137 C UNK
139 C UNK 140 C UNK 142 C
13 1.81 1.81 17.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 103 C UNK 104 C UNK 105 C UNK 106 C UNK 107 C
UNK 110 C UNK 134 C UNK 137 C UNK 140 C UNK 142 C
UNK 143 C UNK 151 C UNK 155 C UNK 156 C UNK 157 C
14 1.54 1.54 18.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 78 C UNK 82 C UNK 105 C UNK 106 C UNK 110 C
UNK 113 C UNK 117 C UNK 133 C UNK 137 C UNK 142 C
UNK 143 C
15 1.98 1.98 18.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 105 C UNK 106 C UNK 107 C UNK 108 C UNK 110 C
UNK 111 C UNK 112 C UNK 115 C UNK 118 C UNK 130 C
UNK 134 C UNK 142 C UNK 143 C UNK 151 C UNK 155 C
UNK 157 C UNK 158 C UNK 161 C UNK 162 C
16 1.80 1.80 18.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 105 C UNK 106 C UNK 107 C UNK 110 C UNK 127 C
UNK 130 C UNK 134 C UNK 142 C UNK 143 C UNK 151 C
UNK 155 C UNK 157 C UNK 158 C UNK 159 C
17 1.37 1.37 19.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 82 C UNK 85 C UNK 86 C UNK 87 C UNK 101 C UNK
102 C UNK 103 C UNK 104 C UNK 105 C UNK 106 C UNK
140 C UNK 142 C
18 1.59 1.59 19.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 78 C UNK 82 C UNK 103 C UNK 104 C UNK 105 C
UNK 106 C UNK 110 C UNK 113 C UNK 117 C UNK 133 C
UNK 137 C UNK 140 C UNK 142 C
19 1.47 1.47 19.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 103 C UNK 104 C UNK 105 C UNK 106 C UNK 110 C
UNK 134 C UNK 135 C UNK 137 C UNK 140 C UNK 142 C
UNK 143 C UNK 148 C UNK 149 C UNK 151 C UNK 152 C
20 1.81 1.81 24.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 103 C UNK 104 C UNK 105 C UNK 106 C UNK 107 C
UNK 108 C UNK 110 C UNK 111 C UNK 112 C UNK 115 C
UNK 118 C UNK 130 C UNK 134 C UNK 137 C UNK 140 C
UNK 142 C UNK 143 C UNK 151 C UNK 155 C UNK 157 C
UNK 158 C UNK 161 C UNK 162 C
21 1.81 1.81 24.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNK 103 C UNK 104 C UNK 105 C UNK 106 C UNK 107 C
UNK 110 C UNK 127 C UNK 130 C UNK 134 C UNK 137 C
UNK 140 C UNK 142 C UNK 143 C UNK 151 C UNK 155 C
UNK 157 C UNK 158 C UNK 159 C
22 1.44 1.91 15.8 -0.56 0.06 17.9 77 3 0 0 2 2 0 0  
23 1.19 1.19 19.8 0.85 0.63 8.3 81 1 0 1 5 4 0 0  
24 1.18 1.31 17.0 0.13 -0.16 10.7 79 2 1 0 3 0 1 0  
25 1.21 1.22 16.5 -1.12 -0.01 22.1 85 2 2 1 2 1 0 0  
26 1.22 1.22 16.6 -0.76 -0.03 21.0 84 3 2 0 2 1 0 0  
27 1.33 1.38 17.5 -0.72 -0.02 13.4 81 3 1 0 4 1 1 0  
28 1.40 1.40 20.2 -1.16 -0.26 19.3 76 3 1 0 4 1 1 0  
29 1.35 1.40 18.0 -0.37 -0.08 12.8 78 2 2 0 2 2 0 0  
30 1.36 1.41 24.7 -0.67 -0.05 17.7 69 4 2 0 2 2 0 0  
31 1.14 2.22 17.1 1.33 0.33 10.5 76 1 1 0 5 1 0 0  
32 1.64 1.64 17.3 1.26 0.19 6.7 82 1 1 2 3 1 0 2  
33 1.45 1.45 19.2 0.19 0.19 8.2 82 3 0 0 5 1 1 0  
34 1.11 1.11 20.0 -0.74 -0.42 14.7 71 2 1 0 3 0 1 0  
35 1.29 1.77 21.7 1.54 0.75 7.0 73 1 1 1 6 2 0 0  
36 1.19 2.37 21.0 2.52 0.76 2.9 79 1 0 0 7 2 1 0  
37 1.71 3.26 16.2 -0.30 -0.14 3.0 92 1 0 3 3 0 1 0  
38 1.40 1.40 16.5 -0.78 -0.47 13.3 85 1 3 1 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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