PDBsum entry 4tot Go to PDB code:  Tunnel analysis for: 4tot calculated with MOLE 2.0 PDB id 4tot Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 2.16 16.3 -0.45 0.22 18.4 76 2 0 1 2 2 0 0  MLE 3 H MVA 4 H BMT 5 H 34E 8 H MLE 10 H 2 1.20 2.15 19.9 -0.36 -0.11 11.0 87 2 0 2 4 2 0 0  MLE 3 H MVA 4 H BMT 5 H ABA 6 H 33X 7 H 34E 8 H 3 1.20 2.15 20.7 -0.07 0.32 17.8 78 3 0 1 3 2 0 0  MLE 2 H MLE 3 H MVA 4 H BMT 5 H MLE 10 H 4 1.21 2.16 27.7 -0.45 0.40 18.4 70 4 1 0 3 4 0 0  MLE 2 H MLE 3 H MVA 4 H BMT 5 H MLE 10 H 5 1.20 2.16 36.5 -0.19 0.52 11.1 67 5 0 1 3 5 0 0  DAL 1 F MLE 2 F MLE 3 F MVA 4 F BMT 5 F 34E 8 F MLE 10 F DAL 1 H MLE 2 H MLE 3 H MVA 4 H BMT 5 H MLE 10 H 6 1.20 2.14 53.0 0.05 0.17 9.2 80 5 1 3 6 4 1 0  DAL 1 F MLE 2 F 34E 8 F DAL 1 H MLE 2 H MLE 3 H MVA 4 H BMT 5 H MLE 10 H 7 1.10 1.18 16.5 -0.90 -0.32 12.7 82 1 1 1 2 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.