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PDBsum entry 4pjh

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4pjh calculated with MOLE 2.0 PDB id
4pjh
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.98 3.85 27.5 -1.31 -0.58 15.0 79 3 2 1 1 2 1 0  
2 1.52 2.81 56.1 -1.56 -0.56 18.4 87 6 3 5 4 0 0 0  
3 1.52 2.71 66.5 -1.00 -0.34 16.3 89 9 3 4 5 0 1 1  
4 1.34 1.64 75.4 -1.31 -0.28 13.8 78 2 5 6 9 5 0 0  GOL 302 A NA 301 E
5 2.44 3.04 25.7 -1.23 -0.65 14.2 85 2 2 1 1 0 1 0  
6 1.15 1.52 36.7 -1.20 -0.17 14.9 75 3 4 4 6 4 0 0  
7 2.05 3.30 44.2 -1.39 -0.13 10.2 77 2 2 3 2 3 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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