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PDBsum entry 4pjh

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4pjh calculated with MOLE 2.0 PDB id
4pjh
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 3.66 39.8 -2.25 0.23 23.0 68 4 3 3 3 10 0 0  GOL 302 A 30W 303 A
2 1.22 3.68 41.1 -2.13 0.32 21.5 67 6 3 3 1 10 0 0  30W 303 C
3 1.39 2.71 16.1 1.06 0.12 6.8 93 0 1 2 6 0 1 0  
4 1.77 2.95 15.8 -2.27 -0.09 22.0 64 2 1 1 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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