PDBsum entry 4oge

Pore analysis for: 4oge calculated with

MOLE 2.0

PDB id

4oge

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

7 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.47

1.52

25.6

-0.62

-0.24

15.6

80

4

1

1

4

1

0

0

2

2.33

2.73

40.5

-2.24

-0.45

23.9

89

9

1

6

2

2

1

0

3

2.34

2.36

46.2

-2.40

-0.51

26.1

90

9

2

6

2

1

1

0

4

2.34

2.34

50.9

-2.88

-0.59

32.2

86

9

6

3

2

0

1

0

5

1.53

1.62

75.7

-2.96

-0.67

32.5

84

11

6

6

2

1

0

0

6

1.71

1.83

89.2

-2.62

-0.60

30.0

85

11

7

6

4

1

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.