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PDBsum entry 4l4v

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Membrane protein/immune system PDB id
4l4v
Contents
Protein chains
262 a.a.
99 a.a.
200 a.a.
243 a.a.
188 a.a.
Ligands
1VY ×2
GOL ×3
Waters ×1102

References listed in PDB file
Key reference
Title Recognition of vitamin b metabolites by mucosal-Associated invariant t cells.
Authors O.Patel, L.Kjer-Nielsen, J.Le nours, S.B.Eckle, R.Birkinshaw, T.Beddoe, A.J.Corbett, L.Liu, J.J.Miles, B.Meehan, R.Reantragoon, M.L.Sandoval-Romero, L.C.Sullivan, A.G.Brooks, Z.Chen, D.P.Fairlie, J.Mccluskey, J.Rossjohn.
Ref. Nat Commun, 2013, 4, 2142. [DOI no: 10.1038/ncomms3142]
PubMed id 23846752
Abstract
The mucosal-associated invariant T-cell antigen receptor (MAIT TCR) recognizes MR1 presenting vitamin B metabolites. Here we describe the structures of a human MAIT TCR in complex with human MR1 presenting a non-stimulatory ligand derived from folic acid and an agonist ligand derived from a riboflavin metabolite. For both vitamin B antigens, the MAIT TCR docks in a conserved manner above MR1, thus acting as an innate-like pattern recognition receptor. The invariant MAIT TCR α-chain usage is attributable to MR1-mediated interactions that prise open the MR1 cleft to allow contact with the vitamin B metabolite. Although the non-stimulatory antigen does not contact the MAIT TCR, the stimulatory antigen does. This results in a higher affinity of the MAIT TCR for a stimulatory antigen in comparison with a non-stimulatory antigen. We formally demonstrate a structural basis for MAIT TCR recognition of vitamin B metabolites, while illuminating how TCRs recognize microbial metabolic signatures.
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