PDBsum entry 4l4v

Pore analysis for: 4l4v calculated with

MOLE 2.0

PDB id

4l4v

Pores calculated on whole structure

Pores calculated excluding ligands

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14 pores, coloured by radius

15 pores, coloured by radius

15 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.11

2.62

26.8

-1.67

-0.21

19.3

81

4

3

2

2

2

0

0

GOL 601 B

2

1.54

2.68

30.3

-1.83

-0.50

23.4

92

4

2

6

1

0

0

0

3

1.62

1.66

40.7

-0.91

-0.31

12.9

79

2

3

5

4

2

0

0

4

2.11

2.72

41.0

-2.01

-0.41

22.8

85

4

5

4

2

2

0

0

GOL 601 B

5

1.26

1.29

42.5

-1.39

-0.39

19.9

89

6

2

4

3

1

0

0

GOL 601 B GOL 602 B

6

1.64

2.31

43.6

-0.64

-0.02

10.0

76

3

3

3

5

5

4

0

7

1.62

1.66

45.5

-0.56

0.02

12.0

75

4

3

4

5

3

0

0

8

2.12

2.62

56.8

-2.03

-0.40

20.8

82

5

6

3

4

3

0

0

GOL 601 B

9

0.81

1.69

168.6

-1.37

-0.38

17.4

85

10

11

7

6

4

3

0

10

2.37

2.37

26.4

-1.38

-0.72

14.4

80

3

3

1

1

0

1

0

11

2.65

4.31

34.9

-0.73

-0.30

14.0

86

5

4

2

3

0

1

1

12

2.08

2.26

48.3

-1.29

-0.38

12.3

77

2

6

2

1

2

3

0

13

2.06

5.42

69.3

-1.42

-0.27

13.2

80

4

4

3

2

2

2

0

14

1.51

1.59

32.3

-0.90

-0.13

13.9

71

2

2

3

5

3

0

0

15

1.69

1.83

25.1

-2.05

-0.74

13.9

87

1

2

4

2

0

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.