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PDBsum entry 4kpy
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Pore analysis for: 4kpy calculated with  MOLE 2.0
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PDB id
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4kpy
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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15 pores,
coloured by radius
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15 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.92 |
2.32 |
31.3 |
-0.76 |
-0.03 |
14.6 |
64 |
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2 |
3 |
0 |
2 |
2 |
2 |
0 |
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TMP 701 A DT 14 E
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2 |
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2.85 |
2.89 |
38.6 |
-1.75 |
-0.54 |
26.4 |
75 |
4 |
5 |
0 |
2 |
1 |
0 |
0 |
DG 11 C DG 12 C DT 13 E DT 14 E DC 5 N DA 6 N DA
7 N DC 8 N
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3 |
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1.33 |
1.87 |
47.5 |
-1.02 |
-0.27 |
18.4 |
80 |
6 |
3 |
1 |
5 |
2 |
1 |
0 |
DG 8 C DT 9 C DG 11 C DG 12 C DT 13 E DT 14 E DC
5 N DC 8 N DC 9 N
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4 |
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2.87 |
2.87 |
48.5 |
-1.77 |
-0.46 |
24.4 |
79 |
7 |
2 |
1 |
1 |
1 |
0 |
0 |
DT 1 E DG 2 E DA 3 E DG 4 E DG 5 E DT 6 E DG 8 E
DT 9 E DT 16 E DT 10 F DA 11 F DC 12 F DT 13 F DA
14 F DC 16 F DT 17 F DA 7 M DC 8 M DC 9 M
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5 |
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3.17 |
3.18 |
50.4 |
-1.52 |
-0.55 |
20.5 |
85 |
6 |
1 |
1 |
1 |
0 |
0 |
0 |
DT 13 C DT 14 C DT 1 E DG 2 E DA 3 E DG 4 E DG 5
E DT 6 E DG 8 E DT 9 E DG 11 E DG 12 E DT 13 E DT
14 E DT 10 F DA 11 F DC 12 F DT 13 F DA 14 F DC
16 F DT 17 F DA 4 M DC 5 M DA 6 M DC 8 M DC 9 M
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6 |
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1.30 |
1.34 |
52.3 |
-0.45 |
-0.20 |
11.4 |
71 |
2 |
3 |
1 |
4 |
2 |
3 |
0 |
TMP 701 A DT 16 E
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7 |
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1.36 |
1.83 |
54.8 |
-1.43 |
-0.39 |
21.2 |
79 |
7 |
6 |
1 |
4 |
2 |
1 |
0 |
DG 8 C DA 7 N DC 8 N DC 9 N
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8 |
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2.23 |
2.24 |
57.3 |
-1.30 |
-0.50 |
17.2 |
76 |
7 |
5 |
0 |
2 |
1 |
1 |
0 |
DG 11 E DG 12 E DT 16 E DA 4 M DC 5 M DA 6 M DA 7
M DC 8 M
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9 |
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2.75 |
2.75 |
66.3 |
-1.24 |
-0.56 |
17.6 |
79 |
5 |
5 |
1 |
4 |
1 |
1 |
0 |
DT 13 C DT 14 C DG 11 E DG 12 E DT 13 E DT 14 E
DT 16 E DA 4 M DC 5 M DA 6 M DA 7 M DC 8 M
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10 |
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2.23 |
2.24 |
73.8 |
-1.67 |
-0.58 |
20.2 |
83 |
7 |
3 |
1 |
1 |
0 |
1 |
0 |
DT 1 E DG 2 E DA 3 E DG 4 E DG 5 E DT 6 E DG 8 E
DT 9 E DG 11 E DG 12 E DT 10 F DA 11 F DC 12 F DT
13 F DA 14 F DC 15 F DC 16 F DT 17 F DA 4 M DC 5
M DA 6 M DC 8 M DC 9 M
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11 |
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1.17 |
1.17 |
88.7 |
-1.76 |
-0.39 |
21.9 |
81 |
9 |
2 |
2 |
2 |
1 |
1 |
0 |
DT 1 E DG 2 E DA 3 E DG 4 E DG 5 E DT 6 E DG 8 E
DT 9 E DT 10 F DA 11 F DC 12 F DT 13 F DA 14 F DC
15 F DC 16 F DT 17 F DC 18 F DG 19 F
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12 |
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1.17 |
1.18 |
92.4 |
-1.37 |
-0.32 |
20.4 |
80 |
9 |
6 |
2 |
5 |
2 |
1 |
0 |
DG 8 E DT 9 E DC 15 F DC 16 F DT 17 F DC 18 F DG
19 F DA 7 M DC 8 M DC 9 M
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13 |
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1.18 |
1.18 |
92.9 |
-0.91 |
-0.31 |
15.8 |
77 |
8 |
5 |
1 |
4 |
2 |
1 |
0 |
DT 13 C DT 14 C DG 8 E DT 9 E DG 11 E DG 12 E DT
13 E DT 14 E DC 15 F DC 16 F DA 4 M DC 5 M DA 6 M
DC 8 M DC 9 M
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14 |
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1.18 |
1.18 |
107.2 |
-1.13 |
-0.40 |
15.8 |
82 |
9 |
5 |
2 |
3 |
1 |
2 |
0 |
DG 8 E DT 9 E DG 11 E DG 12 E DC 15 F DC 16 F DT
17 F DC 18 F DG 19 F DA 4 M DC 5 M DA 6 M DC 8 M
DC 9 M
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15 |
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1.23 |
1.22 |
179.3 |
-1.10 |
-0.51 |
15.3 |
82 |
10 |
11 |
4 |
6 |
2 |
4 |
0 |
DT 13 C DT 14 C DG 8 E DT 9 E DG 11 E DG 12 E DT
13 E DT 14 E DC 15 F DC 16 F DT 17 F DC 18 F DG
19 F DA 4 M DC 5 M DA 6 M DC 8 M DC 9 M
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program