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PDBsum entry 4kpy
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Tunnel analysis for: 4kpy calculated with  MOLE 2.0
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PDB id
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4kpy
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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0 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.27 |
2.19 |
28.1 |
-1.93 |
-0.59 |
29.3 |
74 |
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3 |
3 |
0 |
2 |
0 |
0 |
0 |
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DT 1 C DG 2 C DA 3 C DG 4 C DG 5 C DT 6 C DT 13 D
DA 14 D
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2 |
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1.29 |
1.44 |
44.6 |
-1.49 |
-0.52 |
25.0 |
77 |
6 |
5 |
1 |
3 |
1 |
0 |
0 |
DG 5 C DT 6 C DG 8 C DT 9 C DT 10 D DA 11 D DA 7
N DC 8 N DC 9 N
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3 |
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1.28 |
1.45 |
44.6 |
-1.65 |
-0.55 |
27.1 |
83 |
5 |
4 |
1 |
4 |
0 |
0 |
0 |
DG 5 C DT 6 C DG 8 C DT 9 C DG 11 C DG 12 C DT 10
D DA 11 D DA 4 N DC 5 N DC 8 N DC 9 N
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4 |
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1.29 |
1.44 |
48.0 |
-1.87 |
-0.38 |
24.9 |
77 |
7 |
5 |
1 |
4 |
1 |
1 |
0 |
DG 5 C DT 6 C DG 8 C DT 9 C DT 10 D DA 11 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program