PDBsum entry 4js5 Go to PDB code:  Tunnel analysis for: 4js5 calculated with MOLE 2.0 PDB id 4js5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.61 1.61 27.6 0.37 0.24 6.8 72 3 0 1 6 2 0 1   2 1.60 1.61 27.8 0.18 0.22 6.2 76 2 0 1 8 2 0 1   3 1.12 1.30 78.6 -1.50 -0.42 18.4 82 6 4 6 4 3 1 1  SO4 501 A DT 4 C DT 6 C DT 7 C DT 8 C 4 1.17 1.42 18.1 -0.65 -0.23 16.4 77 2 1 0 4 2 0 0  DT 8 C DT 9 C 5 1.14 1.43 30.2 -0.36 -0.26 13.3 82 3 1 1 6 1 0 0  DT 8 C 6 1.21 1.36 15.4 -0.47 -0.33 2.4 77 0 0 2 1 2 1 0  DT 10 D DT 11 D 7 1.22 1.25 17.1 -1.59 -0.54 18.5 73 2 2 1 1 2 2 0   8 1.23 1.42 17.5 -1.59 -0.61 18.4 76 2 2 1 1 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.