PDBsum entry 4j4b Go to PDB code:  Tunnel analysis for: 4j4b calculated with MOLE 2.0 PDB id 4j4b Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.56 1.56 30.9 0.62 0.00 2.5 79 0 1 2 5 2 2 0  NAI 901 A MG 903 A 0TF 904 A 2 1.54 1.54 32.1 0.02 -0.19 8.2 86 0 4 1 4 0 2 0  NAI 901 A MG 903 A 0TF 904 A 3 1.54 1.54 35.1 -0.76 -0.32 12.9 81 3 3 1 5 0 3 0  NAI 901 A MG 903 A 0TF 904 A 4 1.54 1.54 36.6 -0.64 -0.33 10.1 78 1 4 1 5 0 3 1  NAI 901 A MG 903 A 0TF 904 A 5 1.53 1.53 38.9 -0.42 -0.27 8.0 82 2 1 1 4 0 3 0  NAI 901 A MG 903 A 0TF 904 A 6 1.54 1.54 50.7 -0.51 -0.31 5.2 81 1 3 2 8 0 6 1  NAI 901 A MG 903 A 0TF 904 A 7 1.55 1.55 62.0 0.46 0.03 4.8 80 1 2 4 12 2 4 0  NAI 901 A MG 903 A 0TF 904 A 0TF 301 B NAI 302 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.