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PDBsum entry 4j3u
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Pore analysis for: 4j3u calculated with  MOLE 2.0
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PDB id
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4j3u
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.85 |
2.41 |
27.8 |
-0.59 |
-0.21 |
13.6 |
80 |
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1 |
3 |
3 |
2 |
3 |
0 |
0 |
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SGD 1 D GLC 5 D GLC 6 D GLC 7 D GLC 8 D
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2 |
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2.60 |
2.87 |
28.5 |
-1.41 |
-0.40 |
16.7 |
85 |
3 |
5 |
4 |
1 |
2 |
0 |
0 |
GLC 6 D GLC 7 D
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3 |
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2.50 |
3.13 |
39.9 |
-1.26 |
-0.53 |
11.9 |
86 |
3 |
4 |
6 |
2 |
2 |
1 |
0 |
GLC 6 D GLC 7 D
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4 |
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1.87 |
2.38 |
55.2 |
-1.17 |
-0.36 |
16.4 |
82 |
4 |
6 |
4 |
2 |
4 |
1 |
0 |
SGD 1 D GLC 5 D GLC 6 D GLC 7 D GLC 8 D
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5 |
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1.29 |
1.31 |
92.4 |
-0.49 |
-0.22 |
14.9 |
86 |
4 |
7 |
4 |
8 |
4 |
0 |
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IOD 919 B SGD 1 D GLC 2 D GLC 3 D GLC 4 D GLC 5 D
GLC 6 D GLC 7 D GLC 8 D GLC 9 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program