PDBsum entry 4hcb

Tunnel analysis for: 4hcb calculated with

MOLE 2.0

PDB id

4hcb

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
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visualization
with HETATM:

without HETATM:

5 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.27

1.56

24.7

0.73

0.43

5.8

74

3

1

1

6

2

0

1

SO4 503 A

2

1.33

1.56

27.0

-2.31

-0.46

29.5

74

2

2

1

1

1

0

1

DA 6 C DA 9 C DA 10 C

3

1.33

1.56

32.7

-1.10

-0.25

20.1

72

2

2

2

3

2

0

1

DA 9 C DA 10 C DA 11 C

4

1.27

1.37

33.0

0.09

0.26

10.8

74

4

1

1

6

2

0

1

SO4 503 A

5

1.35

1.56

42.4

-1.83

-0.27

25.6

72

4

4

1

2

3

0

1

DA 9 C DA 10 C DA 11 C

6

1.33

1.56

42.6

-1.84

-0.38

26.6

75

6

3

2

4

2

0

1

SO4 504 A DA 8 C

7

1.35

1.57

50.0

-1.76

-0.27

25.2

73

6

3

4

3

3

3

1

SO4 504 A DA 3 C DA 4 C DA 5 C DA 6 C DA 7 C DA 8
C

8

1.12

1.22

51.3

-1.68

-0.27

28.9

75

7

5

2

4

3

0

1

SO4 504 A DA 4 C DA 5 C DA 6 C DA 7 C DA 8 C

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.