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PDBsum entry 4f8b

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4f8b calculated with MOLE 2.0 PDB id
4f8b
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.21 3.22 25.8 -0.93 0.80 3.9 64 1 1 2 3 8 0 0  PE4 203 D
2 1.05 3.83 47.3 -1.06 0.61 9.2 68 3 3 3 4 11 0 0  PE4 203 D
3 1.19 1.40 54.0 -1.24 -0.28 13.0 79 2 3 0 1 4 0 0  PE4 203 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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