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PDBsum entry 4cyc
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Pore analysis for: 4cyc calculated with MOLE 2.0
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PDB id
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4cyc
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.25 |
1.48 |
28.8 |
-1.98 |
-0.41 |
18.4 |
87 |
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4 |
0 |
2 |
1 |
0 |
0 |
0 |
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DT 8 C DA 10 C DA 11 C DT 12 C DC 15 C DG 18 D DT 19 D DT 22 D DT 23 D
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2 |
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1.30 |
1.51 |
29.6 |
-1.51 |
-0.56 |
13.5 |
91 |
4 |
1 |
5 |
2 |
0 |
0 |
0 |
DC 6 C DA 7 C DT 8 C DA 10 C DA 11 C DT 12 C DC 17 D DG 18 D DT 19 D DT 22 D
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3 |
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1.34 |
1.34 |
33.3 |
-2.30 |
-0.30 |
23.2 |
85 |
4 |
0 |
2 |
2 |
0 |
0 |
0 |
DT 2 C DC 3 C DC 6 C DA 7 C DT 8 C DC 15 C DT 22 D DT 23 D DT 26 D DG 27 D DC 29 D
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4 |
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1.34 |
1.34 |
39.0 |
-1.86 |
-0.37 |
20.4 |
90 |
4 |
1 |
5 |
3 |
0 |
0 |
0 |
DT 2 C DC 3 C DC 6 C DA 7 C DT 8 C DT 26 D DG 27 D DC 29 D DG 30 D
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5 |
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1.35 |
1.35 |
43.7 |
-1.43 |
-0.14 |
13.2 |
75 |
4 |
0 |
2 |
2 |
2 |
0 |
0 |
DT 2 C DC 3 C DC 6 C DA 7 C DT 8 C DA 10 C DA 11 C DT 23 D DT 24 D DA 25 D DT 26 D DG 27 D DC 29 D
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6 |
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1.27 |
1.50 |
46.4 |
-1.93 |
-0.26 |
16.9 |
89 |
5 |
0 |
4 |
3 |
0 |
0 |
0 |
DT 2 C DC 3 C DC 6 C DA 7 C DT 8 C DA 10 C DA 11 C DT 12 C DC 17 D DG 18 D DT 19 D DT 22 D DT 23 D DT 26 D DG 27 D DC 29 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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