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PDBsum entry 4cyc
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Tunnel analysis for: 4cyc calculated with MOLE 2.0
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PDB id
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4cyc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.52 |
1.70 |
26.5 |
-1.15 |
-0.43 |
15.7 |
83 |
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4 |
1 |
3 |
2 |
1 |
1 |
0 |
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DA 7 C DT 8 C
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2 |
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1.27 |
1.49 |
28.9 |
-1.17 |
-0.30 |
16.1 |
85 |
4 |
0 |
3 |
2 |
1 |
1 |
0 |
DT 8 C DA 9 C DA 10 C DA 11 C DT 12 C DT 19 D DT 22 D
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3 |
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1.58 |
1.58 |
29.4 |
-1.57 |
-0.38 |
20.0 |
80 |
4 |
1 |
2 |
1 |
1 |
1 |
0 |
DT 8 C DA 9 C DA 10 C DT 22 D DT 23 D
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4 |
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1.51 |
1.64 |
29.6 |
-1.06 |
-0.44 |
12.7 |
88 |
3 |
0 |
4 |
2 |
1 |
1 |
0 |
DT 8 C DA 21 D DT 22 D
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5 |
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1.27 |
3.09 |
37.7 |
-1.75 |
-0.29 |
19.9 |
79 |
5 |
1 |
3 |
2 |
2 |
1 |
0 |
DT 8 C DA 9 C DA 10 C DT 22 D DT 23 D DT 24 D
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6 |
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1.36 |
1.35 |
48.9 |
-1.55 |
-0.25 |
20.2 |
83 |
6 |
0 |
3 |
3 |
1 |
1 |
0 |
DC 3 C DC 6 C DA 7 C DT 8 C DT 26 D DG 27 D DC 29 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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