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PDBsum entry 3zph

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Pore analysis for: 3zph calculated with MOLE 2.0 PDB id
3zph
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.39 28.0 -0.55 -0.09 9.2 75 1 2 3 3 4 1 0  GOL 301 F
2 1.32 2.09 29.6 -0.30 0.06 12.5 74 1 3 3 4 5 0 0  GOL 301 A
3 1.25 1.25 34.4 -1.30 -0.36 22.4 81 5 4 3 4 4 1 0  
4 1.35 1.39 35.9 -1.15 -0.32 18.1 85 5 4 2 3 1 1 0  
5 1.43 1.43 36.4 -1.15 -0.29 18.9 82 5 3 2 3 2 1 0  
6 1.28 2.14 47.8 -1.57 -0.41 21.8 80 7 6 2 4 4 2 0  
7 1.39 1.58 52.3 -1.39 -0.28 22.7 80 7 5 3 5 5 1 0  
8 1.26 1.26 64.2 -1.44 -0.40 18.9 79 8 6 5 6 9 2 0  
9 1.43 1.43 69.1 -1.35 -0.29 15.9 76 8 5 5 6 11 2 0  
10 1.19 1.32 78.6 -0.37 -0.02 13.9 78 8 5 1 12 5 2 0  
11 1.31 1.31 93.4 -1.33 -0.28 16.3 81 9 6 8 7 8 2 1  
12 1.24 1.42 123.3 -0.72 -0.09 13.6 79 12 6 7 15 10 3 1  
13 1.19 1.31 130.7 -0.83 -0.23 12.9 79 8 9 9 16 12 4 0  GOL 401 D
14 1.19 1.56 137.1 -0.89 -0.17 13.2 80 12 7 9 16 11 2 1  
15 1.21 1.43 144.1 -0.84 -0.21 13.2 78 13 9 8 17 14 3 0  GOL 301 C
16 1.20 1.21 148.4 -0.81 -0.14 13.3 78 13 9 9 17 17 4 0  GOL 301 C
17 1.20 1.45 149.3 -0.88 -0.14 13.4 79 14 8 10 17 15 3 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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