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PDBsum entry 3wts

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Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 3wts calculated with MOLE 2.0 PDB id
3wts
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.49 1.63 35.7 -1.63 -0.28 22.4 74 4 4 1 2 2 1 1  DA 3 D DA 7 D DC 8 D DG 105 E DT 107 E DG 108 E
DT 109 E
2 1.98 1.98 43.7 -1.39 -0.80 15.5 87 1 4 1 0 0 0 0  DT 13 I DC 14 I DT 15 I DG 105 J DA 106 J
3 1.94 1.94 44.4 -1.31 -0.67 13.0 77 3 2 1 0 0 1 0  DC 6 I DA 7 I DG 110 J DG 111 J DT 113 J DT 114 J
4 1.18 1.30 30.0 -1.34 -0.42 9.3 74 1 1 3 0 3 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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