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PDBsum entry 3wts

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 3wts calculated with MOLE 2.0 PDB id
3wts
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.12 1.12 37.6 -1.41 -0.25 17.9 78 4 2 1 2 1 0 1  DA 7 I DC 8 I DA 9 I DG 105 J
2 1.13 1.13 46.0 -1.33 -0.28 10.7 78 3 0 1 1 1 0 1  DA 7 I DC 8 I DA 9 I DG 105 J DA 106 J DT 107 J
3 1.26 2.41 21.8 0.39 0.02 8.3 80 2 1 0 5 2 0 0  
4 1.39 1.38 17.2 -0.76 -0.57 4.1 79 1 0 2 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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