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PDBsum entry 3wc0

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3wc0 calculated with MOLE 2.0 PDB id
3wc0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.46 1.46 21.4 -0.72 -0.12 12.1 86 1 2 5 1 3 0 0  GTP 405 C GTP 302 D MG 303 D MG 304 D
2 1.34 1.56 27.2 -0.17 -0.24 5.7 90 1 1 6 2 2 0 0  GTP 303 F
3 1.24 2.13 15.1 -2.46 -0.38 18.5 77 1 2 2 0 2 1 0  
4 1.53 1.88 15.6 -1.72 -0.22 19.1 70 4 0 1 2 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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