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PDBsum entry 3vs2
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Pore analysis for: 3vs2 calculated with MOLE 2.0
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PDB id
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3vs2
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.31 |
2.00 |
27.1 |
1.77 |
0.70 |
5.6 |
76 |
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0 |
2 |
0 |
6 |
3 |
1 |
0 |
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2 |
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3.56 |
3.57 |
43.9 |
-1.89 |
-0.38 |
18.5 |
82 |
5 |
3 |
4 |
2 |
2 |
1 |
0 |
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3 |
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3.56 |
3.58 |
52.8 |
-2.03 |
-0.39 |
20.3 |
80 |
7 |
4 |
5 |
2 |
3 |
1 |
0 |
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4 |
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1.27 |
1.45 |
65.0 |
-0.85 |
-0.31 |
16.9 |
83 |
4 |
7 |
4 |
9 |
2 |
1 |
0 |
VSB 601 A
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5 |
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1.49 |
2.41 |
66.0 |
-1.87 |
-0.58 |
16.7 |
85 |
6 |
6 |
8 |
2 |
2 |
1 |
0 |
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6 |
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3.57 |
3.59 |
87.1 |
-1.15 |
-0.27 |
10.3 |
75 |
4 |
3 |
2 |
3 |
2 |
5 |
0 |
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7 |
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1.57 |
1.83 |
109.7 |
-1.49 |
-0.46 |
15.9 |
77 |
8 |
8 |
5 |
5 |
4 |
4 |
0 |
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8 |
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1.32 |
1.49 |
117.9 |
-0.74 |
-0.21 |
13.0 |
83 |
9 |
4 |
8 |
15 |
5 |
1 |
0 |
VSB 601 A
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9 |
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1.48 |
2.53 |
164.9 |
-1.12 |
-0.32 |
19.4 |
83 |
5 |
9 |
6 |
9 |
4 |
0 |
0 |
VSB 601 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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