PDBsum entry 3vs2 Go to PDB code:  Tunnel analysis for: 3vs2 calculated with MOLE 2.0 PDB id 3vs2 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.25 16.8 -2.21 -0.75 28.9 86 3 5 2 0 0 0 0  PTR 527 B CA 602 B 2 1.25 1.25 25.0 -2.32 -0.68 29.0 85 5 3 2 0 0 1 0  PTR 527 B 3 1.24 1.24 30.7 -2.99 -0.64 33.8 87 7 2 4 0 1 0 0  PTR 527 B 4 1.24 1.24 37.0 -2.23 -0.38 20.3 85 5 3 4 2 2 1 0  PTR 527 B 5 1.24 1.24 45.8 -1.58 -0.30 18.9 90 6 5 8 2 2 0 0  PTR 527 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.