PDBsum entry 3vps Go to PDB code:  Pore analysis for: 3vps calculated with MOLE 2.0 PDB id 3vps Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.53 25.8 -2.63 -0.66 30.0 76 4 3 1 2 0 2 0  UD1 400 B 2 2.78 2.85 30.4 -1.60 -0.49 20.6 83 4 3 5 1 2 1 0   3 1.58 1.57 31.7 -0.77 -0.41 13.7 85 5 0 1 2 1 0 0  NAD 401 A 4 1.67 1.67 56.0 -1.14 -0.43 15.9 84 7 4 2 5 2 1 0  UD1 400 B NAD 401 B 5 1.26 1.37 62.9 -1.27 -0.44 16.6 82 5 6 2 7 2 1 0  UD1 400 B NAD 401 B 6 2.26 2.69 63.1 -1.46 -0.29 18.9 84 6 6 6 6 3 3 0   7 2.21 2.69 67.2 -1.54 -0.56 20.2 85 4 7 6 5 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.