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PDBsum entry 3vht
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Tunnel analysis for: 3vht calculated with  MOLE 2.0
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PDB id
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3vht
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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11 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
1.48 |
16.3 |
-2.02 |
-0.76 |
9.0 |
93 |
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1 |
1 |
6 |
0 |
1 |
0 |
0 |
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2 |
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1.81 |
1.86 |
16.3 |
-1.09 |
-0.23 |
8.7 |
84 |
2 |
0 |
2 |
1 |
2 |
0 |
0 |
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3 |
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1.52 |
2.01 |
18.9 |
-0.91 |
-0.24 |
10.4 |
84 |
3 |
0 |
1 |
1 |
2 |
0 |
0 |
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4 |
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1.78 |
1.83 |
19.3 |
-1.10 |
-0.23 |
6.2 |
79 |
0 |
2 |
2 |
1 |
3 |
0 |
0 |
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5 |
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1.40 |
2.00 |
24.3 |
-0.67 |
-0.27 |
4.8 |
83 |
0 |
2 |
3 |
1 |
3 |
0 |
0 |
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6 |
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1.79 |
1.84 |
25.3 |
-2.05 |
-0.38 |
22.7 |
80 |
4 |
1 |
2 |
1 |
2 |
1 |
0 |
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7 |
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1.51 |
2.12 |
27.2 |
-1.67 |
-0.35 |
19.0 |
80 |
4 |
1 |
1 |
1 |
2 |
1 |
0 |
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8 |
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1.19 |
2.12 |
18.9 |
-0.95 |
0.05 |
18.8 |
81 |
4 |
0 |
2 |
5 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program