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PDBsum entry 3v6t
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Tunnel analysis for: 3v6t calculated with  MOLE 2.0
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PDB id
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3v6t
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.41 |
1.41 |
33.1 |
-1.22 |
-0.79 |
7.7 |
89 |
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1 |
2 |
3 |
1 |
0 |
0 |
0 |
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DT 5 I DT 6 I DC 13 I DG -9 J DA -8 J DT -7 J
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2 |
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1.43 |
1.43 |
36.4 |
-1.13 |
-0.79 |
3.2 |
95 |
0 |
0 |
5 |
1 |
0 |
0 |
0 |
DT 5 I DT 6 I DA 7 I DA -10 J DG -9 J DA -8 J
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3 |
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1.42 |
1.42 |
37.2 |
-1.22 |
-0.79 |
4.7 |
99 |
0 |
1 |
5 |
1 |
0 |
0 |
0 |
DT 5 I DT 6 I DA 7 I DT 8 I DA -12 J DG -11 J DA -
10 J DG -9 J DA -8 J
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4 |
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1.45 |
1.45 |
40.0 |
-1.61 |
-0.76 |
11.9 |
101 |
1 |
2 |
5 |
1 |
0 |
0 |
0 |
DT 5 I DT 6 I DA 7 I DT 8 I DG -13 J DA -12 J DG -
11 J DA -10 J DG -9 J DA -8 J
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5 |
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1.45 |
1.45 |
44.8 |
-1.52 |
-0.75 |
12.0 |
99 |
1 |
2 |
5 |
1 |
0 |
0 |
0 |
DT 5 I DT 6 I DA 7 I DT 8 I DA -14 J DG -13 J DA -
12 J DG -11 J DA -10 J DG -9 J DA -8 J
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6 |
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1.40 |
1.41 |
45.5 |
-1.68 |
-0.65 |
19.5 |
91 |
4 |
1 |
1 |
0 |
0 |
0 |
0 |
DT -2 I DT 5 I DT 6 I DT -7 J DA -6 J DA -5 J DA -
4 J DG -3 J DG -2 J
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program