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PDBsum entry 3s1n
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Pore analysis for: 3s1n calculated with  MOLE 2.0
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PDB id
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3s1n
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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31 pores,
coloured by radius |
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28 pores,
coloured by radius
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28 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.31 |
1.51 |
41.2 |
-0.96 |
-0.44 |
14.3 |
85 |
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2 |
5 |
4 |
3 |
2 |
1 |
0 |
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2 |
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2.13 |
4.04 |
43.0 |
-2.22 |
-0.49 |
29.4 |
85 |
6 |
2 |
1 |
4 |
0 |
3 |
0 |
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3 |
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3.10 |
3.09 |
48.3 |
-2.65 |
-0.58 |
27.4 |
75 |
6 |
5 |
4 |
4 |
1 |
5 |
0 |
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4 |
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1.09 |
2.05 |
59.5 |
-0.92 |
-0.27 |
17.5 |
76 |
6 |
4 |
4 |
7 |
4 |
0 |
1 |
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5 |
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1.17 |
1.54 |
62.1 |
-1.18 |
-0.09 |
24.2 |
78 |
7 |
9 |
0 |
9 |
2 |
0 |
0 |
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6 |
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3.03 |
3.14 |
69.1 |
-2.66 |
-0.75 |
26.9 |
85 |
7 |
8 |
6 |
2 |
0 |
0 |
0 |
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7 |
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3.53 |
3.99 |
73.3 |
-1.88 |
-0.36 |
23.3 |
78 |
9 |
2 |
2 |
3 |
1 |
5 |
0 |
DA 6 R DA 18 T DT 19 T
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8 |
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2.61 |
2.71 |
74.1 |
-2.47 |
-0.67 |
29.2 |
85 |
8 |
9 |
6 |
4 |
0 |
2 |
0 |
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9 |
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3.24 |
3.42 |
83.5 |
-1.58 |
-0.40 |
16.8 |
78 |
6 |
2 |
5 |
3 |
3 |
1 |
0 |
DA 6 R DA 18 T DT 19 T
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10 |
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2.55 |
2.60 |
89.1 |
-1.55 |
-0.37 |
18.1 |
82 |
9 |
6 |
6 |
7 |
1 |
4 |
0 |
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11 |
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1.46 |
1.52 |
90.0 |
-1.84 |
-0.51 |
27.9 |
82 |
7 |
5 |
0 |
2 |
0 |
0 |
0 |
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12 |
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1.28 |
1.27 |
93.4 |
-2.09 |
-0.38 |
26.1 |
82 |
10 |
7 |
4 |
3 |
4 |
3 |
0 |
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13 |
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2.04 |
2.93 |
95.6 |
-1.74 |
-0.42 |
17.5 |
86 |
7 |
3 |
6 |
4 |
2 |
0 |
0 |
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14 |
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2.01 |
3.22 |
96.5 |
-1.74 |
-0.08 |
26.6 |
75 |
10 |
1 |
2 |
5 |
2 |
3 |
0 |
DA 6 R
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15 |
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2.06 |
3.01 |
100.8 |
-1.72 |
-0.27 |
21.0 |
84 |
11 |
3 |
4 |
6 |
3 |
4 |
0 |
DA 6 R
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16 |
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2.01 |
3.22 |
106.6 |
-1.96 |
-0.41 |
24.4 |
75 |
9 |
3 |
3 |
3 |
2 |
2 |
0 |
DA 6 R DA 18 T DT 19 T
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17 |
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2.58 |
2.68 |
110.3 |
-2.09 |
-0.40 |
28.7 |
78 |
18 |
9 |
2 |
8 |
2 |
2 |
0 |
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18 |
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1.27 |
2.25 |
112.4 |
-1.43 |
-0.11 |
23.5 |
82 |
15 |
6 |
6 |
18 |
4 |
0 |
0 |
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19 |
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1.22 |
2.28 |
117.7 |
-1.45 |
-0.20 |
23.3 |
80 |
16 |
9 |
3 |
15 |
6 |
0 |
0 |
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20 |
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1.46 |
1.60 |
118.0 |
-1.52 |
-0.45 |
21.5 |
83 |
11 |
7 |
7 |
6 |
2 |
0 |
0 |
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21 |
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2.01 |
3.22 |
118.2 |
-2.13 |
-0.42 |
25.6 |
81 |
9 |
4 |
4 |
4 |
2 |
1 |
0 |
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22 |
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1.20 |
1.55 |
125.9 |
-1.81 |
-0.22 |
25.3 |
80 |
14 |
8 |
5 |
13 |
4 |
2 |
0 |
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23 |
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1.22 |
2.25 |
170.7 |
-1.60 |
-0.23 |
22.1 |
84 |
19 |
10 |
11 |
21 |
5 |
0 |
0 |
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24 |
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2.25 |
2.28 |
176.1 |
-2.18 |
-0.53 |
29.0 |
81 |
14 |
11 |
6 |
4 |
2 |
0 |
0 |
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25 |
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2.13 |
2.85 |
187.2 |
-1.35 |
-0.29 |
20.9 |
84 |
17 |
8 |
5 |
7 |
5 |
1 |
0 |
DA 6 R DA 18 T DT 19 T
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26 |
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1.24 |
2.26 |
222.1 |
-1.74 |
-0.23 |
23.3 |
79 |
25 |
14 |
10 |
18 |
9 |
5 |
0 |
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27 |
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2.71 |
2.52 |
318.1 |
-2.03 |
-0.42 |
29.2 |
82 |
29 |
28 |
11 |
17 |
3 |
4 |
0 |
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28 |
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1.19 |
1.26 |
39.3 |
-0.41 |
-0.01 |
15.5 |
85 |
4 |
1 |
4 |
7 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program