PDBsum entry 3s1n Go to PDB code:  Tunnel analysis for: 3s1n calculated with MOLE 2.0 PDB id 3s1n Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.30 59.3 -1.24 -0.24 15.9 83 5 3 10 7 3 1 0   2 1.14 1.29 59.2 -1.38 -0.28 13.9 82 5 4 7 7 3 2 0   3 1.12 1.28 71.6 -1.29 -0.25 16.8 79 7 5 8 6 4 1 0   4 1.14 1.28 74.3 -1.39 -0.21 14.2 80 6 5 9 6 5 1 0   5 1.14 1.27 74.7 -1.51 -0.22 17.5 81 6 5 8 4 4 1 0   6 1.31 3.56 29.8 0.46 0.30 10.2 85 3 0 1 6 2 1 0   7 1.20 1.29 44.4 0.24 0.12 9.6 80 4 1 3 9 4 2 0   8 1.57 1.57 15.1 -2.37 -0.63 3.1 75 0 0 3 1 1 0 0   9 1.51 1.54 16.1 -1.95 -0.42 10.2 73 0 1 1 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.