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PDBsum entry 3pip

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Top Page protein dna_rna ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 3pip calculated with MOLE 2.0 PDB id
3pip
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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1 tunnel, coloured by tunnel radius 1 tunnel, coloured by tunnel radius 1 tunnel, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.34 18.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1918 X A 1919 X A 1920 X U 1923 X C 1924 X C
1925 X C 1945 X U 1946 X G 1947 X C 1948 X C 1950
X

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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