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PDBsum entry 3ohc
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Tunnel analysis for: 3ohc calculated with  MOLE 2.0
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PDB id
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3ohc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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2 tunnels,
coloured by
tunnel radius
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2 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.13 |
1.17 |
108.1 |
-0.90 |
-0.62 |
11.9 |
86 |
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10 |
0 |
0 |
2 |
0 |
0 |
0 |
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A 949 A U 950 A G 951 A G 971 A C 972 A G 973 A A
974 A A 975 A A 977 A G 1224 A U 1257 A G 1258 A
C 1259 A C 1260 A C 1284 A A 1324 A C 1325 A G
1355 A G 1356 A C 1359 A A 1360 A G 1361 A C 1362
A A 1363 A i:A C 1363 A U 1364 A G 1365 A C 1366 A
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2 |
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1.15 |
1.16 |
116.0 |
-0.91 |
-0.62 |
11.4 |
78 |
8 |
1 |
2 |
1 |
1 |
0 |
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C 940 A G 941 A G 942 A A 949 A U 950 A G 951 A G
971 A C 972 A G 973 A A 974 A A 975 A A 977 A G
1224 A C 1234 A U 1235 A A 1236 A C 1237 A A 1324
A C 1325 A C 1336 A G 1337 A U 1351 A C 1352 A G
1353 A C 1354 A G 1355 A G 1356 A A 1363 A i:A C
1363 A U 1364 A G 1365 A C 1366 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program