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PDBsum entry 3o2z
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Pore analysis for: 3o2z calculated with  MOLE 2.0
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PDB id
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3o2z
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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30 pores,
coloured by radius |
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30 pores,
coloured by radius
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30 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.31 |
1.31 |
42.3 |
0.63 |
-0.07 |
2.9 |
86 |
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1 |
0 |
1 |
9 |
0 |
0 |
0 |
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A 579 1 C 1274 1 A 1275 1 A 1427 1
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2 |
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1.66 |
1.66 |
58.4 |
0.62 |
-0.06 |
6.4 |
87 |
4 |
1 |
4 |
10 |
2 |
0 |
0 |
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3 |
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1.31 |
1.31 |
59.6 |
1.44 |
0.19 |
1.9 |
91 |
0 |
0 |
2 |
15 |
0 |
0 |
0 |
A 579 1 C 1274 1 A 1275 1 A 1427 1
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4 |
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1.59 |
1.65 |
82.7 |
0.22 |
-0.15 |
9.5 |
85 |
8 |
0 |
1 |
12 |
0 |
0 |
0 |
A 1217 1 G 1218 1 A 1219 1 C 1220 1 A 1221 1 U
1257 1 G 1265 1 U 1266 1 G 1267 1 G 1435 1 U 1437
1
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5 |
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1.22 |
1.24 |
88.1 |
-0.43 |
-0.46 |
11.3 |
92 |
6 |
2 |
5 |
11 |
0 |
0 |
0 |
A 1217 1 G 1218 1 A 1219 1 C 1220 1 A 1221 1 U
1257 1 G 1435 1 A 1436 1
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6 |
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1.37 |
1.37 |
101.8 |
-0.46 |
-0.48 |
6.5 |
93 |
3 |
1 |
8 |
7 |
2 |
0 |
0 |
A 1388 1 C 1389 1 U 1390 1 A 1391 1 U 1392 1 C
1393 1 G 1394 1 G 1395 1 U 1396 1 U 1398 1 OHX
1850 1 UNK 2 a UNK 6 a UNK 9 a UNK 10 a UNK 13 a
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7 |
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1.46 |
1.76 |
116.2 |
-0.76 |
-0.40 |
10.4 |
80 |
4 |
3 |
5 |
5 |
3 |
2 |
0 |
U 1392 1 C 1393 1 G 1394 1 G 1395 1 U 1396 1 U
1398 1 U 1407 1 G 1408 1 G 1409 1 OHX 1850 1 UNK
2 a UNK 6 a UNK 9 a
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8 |
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1.39 |
1.39 |
128.2 |
0.45 |
-0.15 |
5.7 |
82 |
3 |
0 |
1 |
10 |
0 |
1 |
0 |
C 575 1 G 577 1 A 1001 1 G 1002 1 A 1003 1 A 1005
1 C 1634 1 C 1637 1 G 1638 1 C 1639 1 C 1640 1 A
1755 1 A 1756 1 G 1757 1 G 1760 1 U 1761 1 G 1768
1 U 1769 1 G 1780 1 A 1781 1 A 1782 1 OHX 1838 1
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9 |
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1.27 |
1.27 |
137.4 |
-0.20 |
-0.50 |
5.4 |
92 |
2 |
1 |
4 |
10 |
1 |
1 |
0 |
G 1330 1 A 1331 1 C 1332 1 C 1333 1 U 1334 1 U
1335 1 A 1384 1 G 1385 1 G 1387 1 C 1389 1 U 1390
1 A 1391 1 C 1393 1 G 1394 1 G 1395 1 U 1396 1 U
1398 1 G 1402 1 C 1403 1 U 1415 1 OHX 1850 1 UNK
2 a UNK 6 a UNK 9 a UNK 12 a UNK 13 a UNK 16 a
UNK 20 a
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10 |
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1.38 |
1.76 |
136.5 |
-0.55 |
-0.30 |
8.7 |
85 |
7 |
3 |
10 |
12 |
5 |
2 |
0 |
A 1388 1 A 1391 1 U 1392 1 U 1407 1 G 1408 1 G
1409 1 A 1410 1
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11 |
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1.30 |
1.30 |
136.2 |
-1.07 |
-0.60 |
9.1 |
90 |
4 |
2 |
9 |
5 |
2 |
2 |
0 |
A 1388 1 C 1389 1 U 1390 1 A 1391 1 U 1392 1 C
1393 1 G 1394 1 G 1395 1 U 1396 1 U 1398 1 OHX
1850 1 UNK 2 a UNK 6 a UNK 9 a UNK 10 a UNK 13 a
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12 |
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1.34 |
1.34 |
150.0 |
-0.46 |
-0.38 |
9.2 |
83 |
5 |
4 |
4 |
11 |
4 |
2 |
1 |
C 1158 1 C 1159 1 C 1280 1 G 1281 1 U 1282 1 U
1285 1 A 1312 1 G 1408 1 G 1412 1 U 1414 1 A 1417
1 G 1418 1 G 1419 1 C 1420 1 A 1421 1 U 1582 1 A
1583 1 G 1584 1 A 1614 1 OHX 1908 1 OHX 1914 1
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13 |
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1.58 |
1.58 |
158.7 |
-0.35 |
-0.78 |
3.3 |
108 |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
A 1001 1 G 1002 1 A 1003 1 A 1005 1 A 1147 1 C
1148 1 G 1149 1 U 1191 1 A 1193 1 U 1283 1 G 1288
1 U 1289 1 U 1305 1 C 1306 1 G 1308 1 C 1309 1 U
1314 1 G 1316 1 C 1317 1 G 1318 1 A 1325 1 U 1390
1 A 1391 1 C 1393 1 G 1394 1 G 1395 1 U 1396 1 U
1398 1 G 1402 1 C 1403 1 A 1425 1 C 1426 1 A 1427
1 C 1624 1 C 1625 1 U 1626 1 C 1636 1 C 1637 1 G
1638 1 G 1760 1 U 1761 1 G 1767 1 G 1768 1 U 1769
1 G 1780 1 A 1781 1 A 1782 1 OHX 1839 1 OHX 1850
1 OHX 1895 1 UNK 2 a UNK 6 a UNK 9 a UNK 12 a UNK
13 a UNK 15 a UNK 16 a
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14 |
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1.97 |
2.03 |
165.4 |
-0.81 |
-0.60 |
10.1 |
87 |
8 |
3 |
9 |
6 |
1 |
1 |
0 |
A 1217 1 G 1218 1 A 1219 1 C 1220 1 A 1221 1 U
1257 1 G 1330 1 A 1331 1 C 1332 1 C 1333 1 U 1334
1 U 1335 1 A 1384 1 G 1385 1 G 1387 1 C 1389 1 U
1390 1 A 1391 1 C 1393 1 G 1394 1 G 1395 1 U 1396
1 U 1398 1 G 1402 1 C 1403 1 U 1415 1 G 1435 1 A
1436 1 OHX 1850 1 UNK 2 a UNK 6 a UNK 9 a UNK 12
a UNK 13 a UNK 16 a UNK 20 a
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15 |
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1.62 |
1.61 |
165.4 |
-0.16 |
-0.25 |
8.0 |
78 |
6 |
3 |
3 |
12 |
4 |
2 |
1 |
C 1158 1 C 1159 1 C 1280 1 G 1281 1 U 1282 1 U
1285 1 A 1312 1 G 1408 1 G 1412 1 U 1414 1 A 1417
1 G 1418 1 G 1419 1 C 1420 1 A 1421 1 A 1422 1 U
1423 1 A 1424 1 A 1425 1 U 1582 1 A 1583 1 G 1584
1 A 1614 1 OHX 1908 1 OHX 1914 1
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16 |
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1.29 |
1.29 |
167.2 |
-0.62 |
-0.56 |
8.8 |
79 |
4 |
3 |
2 |
6 |
3 |
1 |
1 |
C 575 1 G 576 1 G 577 1 U 578 1 A 579 1 C 1158 1
C 1159 1 C 1274 1 A 1275 1 C 1280 1 G 1281 1 U
1282 1 U 1285 1 A 1312 1 G 1408 1 G 1412 1 U 1414
1 A 1417 1 G 1418 1 G 1419 1 C 1420 1 A 1421 1 A
1422 1 U 1423 1 A 1424 1 A 1425 1 A 1427 1 U 1582
1 A 1583 1 G 1584 1 A 1614 1 C 1634 1 OHX 1908 1
OHX 1914 1
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17 |
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1.30 |
1.30 |
173.3 |
-0.66 |
-0.67 |
7.0 |
87 |
6 |
0 |
5 |
6 |
1 |
1 |
0 |
C 575 1 G 576 1 G 577 1 U 578 1 A 579 1 C 1274 1
A 1275 1 C 1279 1 C 1280 1 G 1330 1 A 1331 1 C
1332 1 C 1333 1 U 1334 1 U 1335 1 A 1384 1 G 1385
1 G 1387 1 C 1389 1 U 1390 1 A 1391 1 C 1393 1 G
1394 1 G 1395 1 U 1396 1 U 1398 1 G 1402 1 C 1403
1 U 1415 1 C 1420 1 A 1421 1 U 1423 1 A 1424 1 A
1425 1 A 1427 1 C 1634 1 OHX 1850 1 UNK 2 a UNK 6
a UNK 9 a UNK 12 a UNK 13 a UNK 16 a UNK 20 a
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18 |
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2.25 |
2.24 |
180.0 |
-0.86 |
-0.57 |
12.1 |
84 |
11 |
6 |
8 |
7 |
3 |
1 |
1 |
C 1158 1 C 1159 1 A 1217 1 G 1218 1 A 1219 1 C
1220 1 A 1221 1 U 1257 1 C 1280 1 G 1281 1 U 1282
1 U 1285 1 A 1312 1 G 1408 1 G 1412 1 U 1414 1 A
1417 1 G 1418 1 G 1419 1 C 1420 1 A 1421 1 G 1435
1 A 1436 1 U 1582 1 A 1583 1 G 1584 1 A 1614 1
OHX 1908 1 OHX 1914 1
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19 |
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1.55 |
1.62 |
183.1 |
-0.45 |
-0.41 |
10.5 |
82 |
10 |
2 |
4 |
15 |
4 |
1 |
0 |
U 1290 1 G 1291 1 G 1292 1 U 1293 1 C 1317 1 G
1318 1 U 1320 1 G 1324 1 U 1390 1 C 1393 1 G 1394
1 G 1395 1 U 1396 1 U 1398 1 A 1400 1 A 1401 1 G
1402 1 C 1403 1 A 1424 1 OHX 1839 1 OHX 1850 1
OHX 1895 1 UNK 2 a UNK 6 a UNK 8 a UNK 9 a UNK 12
a
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20 |
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2.54 |
2.54 |
200.0 |
-0.46 |
-0.80 |
4.0 |
97 |
2 |
0 |
1 |
0 |
0 |
0 |
0 |
C 351 1 C 627 1 G 628 1 U 629 1 A 630 1 G 631 1 G
634 1 A 807 1 U 808 1 G 867 1 A 939 1 A 940 1 G
954 1 U 965 1 A 966 1 A 967 1 U 968 1 C 969 1 U
1029 1 A 1030 1 U 1031 1 C 1033 1 C 1034 1 A 1076
1 C 1078 1 A 1088 1 U 1089 1 C 1090 1 A 1091 1 A
1092 1 A 1093 1 A 1143 1 U 1144 1 G 1153 1 G 1154
1 G 1155 1 U 1302 1 U 1305 1 C 1306 1 U 1307 1 G
1308 1 C 1309 1 U 1310 1 U 1314 1 G 1316 1 C 1317
1 G 1318 1 A 1325 1 U 1390 1 A 1391 1 C 1393 1 G
1394 1 G 1395 1 U 1396 1 U 1398 1 G 1402 1 C 1403
1 C 1625 1 U 1626 1 U 1627 1 U 1628 1 G 1629 1 G
1792 1 OHX 1836 1 OHX 1850 1 OHX 1880 1 OHX 1895
1 UNK 2 a UNK 6 a UNK 9 a UNK 12 a UNK 13 a UNK
15 a UNK 16 a
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21 |
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1.57 |
1.77 |
208.4 |
-0.76 |
-0.43 |
11.0 |
88 |
12 |
5 |
16 |
13 |
4 |
1 |
0 |
A 1217 1 G 1218 1 A 1219 1 C 1220 1 A 1221 1 U
1257 1 C 1333 1 U 1334 1 A 1384 1 G 1385 1 G 1386
1 G 1387 1 A 1388 1 U 1392 1 G 1435 1 A 1436 1
UNK 18 a UNK 21 a
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22 |
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1.49 |
1.68 |
212.6 |
-0.30 |
-0.30 |
8.4 |
87 |
12 |
2 |
14 |
20 |
5 |
1 |
0 |
C 1279 1 C 1280 1 C 1333 1 U 1334 1 A 1384 1 G
1385 1 G 1386 1 G 1387 1 A 1388 1 U 1392 1 C 1420
1 A 1421 1 U 1423 1 A 1424 1 A 1425 1 UNK 18 a
UNK 21 a
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23 |
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1.37 |
1.37 |
216.3 |
-0.63 |
-0.44 |
8.8 |
88 |
10 |
2 |
12 |
13 |
4 |
1 |
0 |
C 575 1 G 576 1 G 577 1 U 578 1 A 579 1 C 1274 1
A 1275 1 C 1279 1 C 1280 1 C 1333 1 U 1334 1 A
1384 1 G 1385 1 G 1386 1 G 1387 1 A 1388 1 U 1392
1 C 1420 1 A 1421 1 U 1423 1 A 1424 1 A 1425 1 A
1427 1 C 1634 1 UNK 18 a UNK 21 a
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24 |
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2.65 |
2.65 |
223.7 |
-0.61 |
-0.65 |
7.0 |
78 |
4 |
3 |
2 |
3 |
2 |
2 |
0 |
C 351 1 C 627 1 G 628 1 U 629 1 A 630 1 G 631 1 G
634 1 A 807 1 U 808 1 G 867 1 A 939 1 A 940 1 G
954 1 U 965 1 A 966 1 A 967 1 U 968 1 C 969 1 U
1029 1 A 1030 1 U 1031 1 C 1033 1 C 1034 1 A 1076
1 C 1078 1 A 1088 1 U 1089 1 C 1090 1 A 1091 1 A
1092 1 A 1093 1 A 1143 1 U 1144 1 G 1153 1 G 1154
1 G 1155 1 U 1302 1 U 1307 1 G 1308 1 C 1309 1 U
1310 1 C 1403 1 C 1404 1 G 1405 1 A 1406 1 U 1407
1 C 1615 1 G 1616 1 U 1617 1 U 1627 1 U 1628 1 G
1629 1 G 1792 1 OHX 1836 1
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25 |
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1.55 |
1.71 |
237.7 |
0.02 |
-0.33 |
7.6 |
85 |
10 |
3 |
7 |
24 |
1 |
2 |
1 |
U 9 1 C 575 1 G 577 1 A 887 1 A 919 1 U 928 1 A
929 1 A 930 1 G 1110 1 G 1111 1 U 1136 1 A 1137 1
A 1138 1 A 1139 1 C 1634 1 C 1641 1 G 1642 1 A
1753 1 A 1755 1 U 1770 1 U 1771 1 C 1772 1 C 1773
1 C 1783 1 C 1784 1 U 1785 1 G 1786 1 C 1787 1 G
1788 1 G 1789 1 OHX 1851 1 OHX 1897 1 UNK 49 c
UNK 50 c UNK 20 e UNK 21 e UNK 11 f UNK 15 f
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26 |
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1.45 |
1.69 |
240.8 |
-0.56 |
-0.59 |
6.4 |
88 |
7 |
3 |
9 |
9 |
2 |
1 |
1 |
A 1001 1 G 1002 1 A 1003 1 A 1005 1 G 1149 1 C
1158 1 C 1159 1 A 1160 1 U 1191 1 C 1192 1 A 1193
1 U 1282 1 U 1285 1 A 1312 1 A 1388 1 A 1391 1 U
1392 1 U 1407 1 G 1408 1 G 1409 1 A 1410 1 G 1412
1 U 1414 1 A 1417 1 G 1418 1 G 1419 1 C 1580 1 U
1582 1 A 1583 1 G 1584 1 A 1614 1 U 1621 1 G 1622
1 C 1623 1 C 1636 1 C 1637 1 G 1638 1 G 1760 1 U
1761 1 G 1767 1 G 1768 1 U 1769 1 G 1780 1 A 1781
1 A 1782 1 OHX 1908 1 OHX 1914 1
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27 |
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2.25 |
2.25 |
242.2 |
-0.40 |
-0.80 |
3.4 |
117 |
0 |
0 |
1 |
0 |
0 |
0 |
0 |
U 873 1 U 1029 1 A 1030 1 U 1031 1 G 1041 1 G
1042 1 A 1043 1 U 1044 1 C 1045 1 G 1046 1 G 1047
1 G 1048 1 A 1065 1 C 1066 1 C 1067 1 C 1068 1 A
1069 1 C 1070 1 U 1071 1 C 1072 1 G 1073 1 G 1074
1 C 1075 1 A 1076 1 C 1077 1 C 1078 1 A 1088 1 U
1089 1 C 1090 1 A 1091 1 A 1092 1 A 1143 1 U 1144
1 G 1153 1 G 1154 1 G 1155 1 U 1302 1 U 1303 1 U
1305 1 C 1306 1 U 1307 1 G 1308 1 C 1309 1 U 1310
1 U 1314 1 G 1316 1 C 1317 1 G 1318 1 A 1325 1 U
1390 1 A 1391 1 C 1393 1 G 1394 1 G 1395 1 U 1396
1 U 1398 1 G 1402 1 C 1403 1 C 1625 1 U 1626 1 U
1627 1 U 1628 1 G 1629 1 G 1792 1 OHX 1805 1 OHX
1849 1 OHX 1850 1 OHX 1880 1 OHX 1895 1 UNK 2 a
UNK 6 a UNK 9 a UNK 12 a UNK 13 a UNK 15 a UNK 16
a UNK 4 c UNK 17 c UNK 20 c UNK 21 c UNK 28 c UNK
32 c UNK 36 c UNK 38 c UNK 39 c UNK 40 c UNK 41 c
UNK 67 c UNK 69 c UNK 74 c UNK 76 c UNK 77 c UNK
78 c UNK 79 c UNK 80 c UNK 81 c UNK 85 c UNK 88 c
UNK 89 c UNK 90 c OHX 100 c
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28 |
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2.51 |
2.51 |
267.9 |
-0.34 |
-0.57 |
7.3 |
89 |
6 |
3 |
5 |
6 |
1 |
1 |
0 |
G 876 1 A 887 1 U 896 1 C 897 1 A 919 1 U 928 1 A
929 1 A 930 1 U 935 1 C 943 1 A 944 1 U 1029 1 A
1030 1 C 1078 1 A 1088 1 U 1089 1 C 1090 1 A 1143
1 U 1144 1 G 1153 1 G 1154 1 G 1155 1 U 1302 1 U
1305 1 C 1306 1 U 1307 1 G 1308 1 C 1309 1 U 1310
1 U 1314 1 G 1316 1 C 1317 1 G 1318 1 A 1325 1 U
1390 1 A 1391 1 C 1393 1 G 1394 1 G 1395 1 U 1396
1 U 1398 1 G 1402 1 C 1403 1 C 1625 1 U 1626 1 U
1627 1 U 1628 1 G 1629 1 G 1789 1 A 1790 1 A 1791
1 G 1792 1 OHX 1839 1 OHX 1850 1 OHX 1880 1 OHX
1890 1 OHX 1895 1 OHX 1897 1 UNK 2 a UNK 6 a UNK
9 a UNK 12 a UNK 13 a UNK 15 a UNK 16 a UNK 49 c
UNK 50 c UNK 11 f UNK 15 f
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29 |
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1.56 |
1.60 |
279.1 |
-0.15 |
-0.47 |
6.5 |
85 |
7 |
2 |
4 |
19 |
0 |
1 |
0 |
U 1 1 U 3 1 G 7 1 U 8 1 U 9 1 A 11 1 U 12 1 A 22
1 G 23 1 A 213 1 U 216 1 A 217 1 A 221 1 A 222 1
U 223 1 C 224 1 A 226 1 U 227 1 A 236 1 G 246 1 A
247 1 U 248 1 U 249 1 A 367 1 U 368 1 A 369 1 G
372 1 G 552 1 G 553 1 C 573 1 G 574 1 C 575 1 G
739 1 A 740 1 C 741 1 U 742 1 U 744 1 U 745 1 A
746 1 C 747 1 U 748 1 U 749 1 G 751 1 U 759 1 A
760 1 U 792 1 A 793 1 U 794 1 U 795 1 G 797 1 C
798 1 A 799 1 U 800 1 U 828 1 A 829 1 U 830 1 U
831 1 U 832 1 U 833 1 G 834 1 U 835 1 U 836 1 G
837 1 G 838 1 C 1634 1 OHX 1824 1 OHX 1840 1 OHX
1868 1 OHX 1881 1 OHX 1900 1
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30 |
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1.65 |
1.73 |
367.2 |
-0.34 |
-0.47 |
7.8 |
87 |
11 |
7 |
14 |
24 |
3 |
3 |
1 |
G 876 1 A 887 1 A 919 1 U 928 1 A 929 1 A 930 1 U
935 1 C 943 1 A 944 1 U 1029 1 A 1030 1 C 1078 1
A 1088 1 U 1089 1 C 1090 1 A 1143 1 U 1144 1 G
1153 1 G 1154 1 G 1155 1 U 1302 1 U 1307 1 G 1308
1 C 1309 1 U 1310 1 A 1388 1 A 1391 1 U 1392 1 C
1403 1 C 1404 1 G 1405 1 A 1406 1 U 1407 1 G 1408
1 G 1409 1 A 1410 1 C 1615 1 G 1616 1 U 1617 1 U
1627 1 U 1628 1 G 1629 1 G 1789 1 A 1790 1 A 1791
1 G 1792 1 OHX 1890 1 OHX 1897 1 UNK 49 c UNK 50
c UNK 11 f UNK 15 f
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program