PDBsum entry 3nip Go to PDB code:  Pore analysis for: 3nip calculated with MOLE 2.0 PDB id 3nip Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 2.68 64.1 -1.31 -0.19 21.5 84 7 5 2 4 3 1 0   2 1.35 1.52 80.1 -1.61 -0.16 28.4 83 8 4 1 5 2 0 0   3 1.20 1.06 95.2 -1.20 -0.41 14.2 81 9 5 6 9 4 2 0  16D 328 B 4 1.25 1.41 117.5 -0.05 -0.21 10.0 81 6 8 4 19 2 4 0  16D 327 E 5 1.26 1.26 138.5 -0.23 -0.24 11.4 82 10 5 4 19 2 4 0  16D 328 B 16D 327 D 6 1.26 1.23 155.7 -0.40 -0.10 11.9 82 6 9 5 18 4 7 0  16D 327 B 16D 328 B 7 1.27 1.27 156.6 -0.54 -0.20 12.9 82 6 12 5 19 2 5 0  16D 327 B 16D 327 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.