PDBsum entry 3n4f Go to PDB code:  Pore analysis for: 3n4f calculated with MOLE 2.0 PDB id 3n4f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.27 27.3 -0.22 -0.32 15.6 77 1 2 1 2 0 0 0   2 2.86 2.86 39.9 -0.86 -0.48 14.2 85 1 4 4 4 1 1 0  MSE 157 A 3 1.66 1.74 43.0 -1.62 -0.76 16.1 89 2 2 2 1 0 1 0   4 2.31 3.73 45.5 -1.84 -0.53 13.3 88 5 4 5 2 2 0 0   5 2.31 3.63 48.9 -2.15 -0.55 23.6 91 9 4 5 3 1 1 0   6 2.12 3.24 53.8 -1.82 -0.52 16.7 90 5 6 6 3 1 1 0  MSE 157 D 7 2.10 3.16 56.9 -2.01 -0.52 26.1 91 9 5 6 3 0 2 0  MSE 157 D 8 3.65 4.53 64.2 -1.30 -0.69 18.6 87 3 9 2 2 0 1 0   9 2.34 2.34 90.3 -1.95 -0.63 23.2 90 10 11 8 2 1 0 0   10 1.66 1.72 103.0 -1.49 -0.62 18.0 87 4 9 5 4 0 2 0  MSE 157 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.