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PDBsum entry 3n4f
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Tunnel analysis for: 3n4f calculated with  MOLE 2.0
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PDB id
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3n4f
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.28 |
2.62 |
22.1 |
-2.44 |
-0.28 |
33.4 |
74 |
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5 |
4 |
2 |
2 |
5 |
0 |
0 |
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2 |
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1.56 |
1.69 |
17.8 |
-1.91 |
-0.65 |
24.6 |
86 |
3 |
3 |
2 |
2 |
1 |
0 |
0 |
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3 |
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1.12 |
2.43 |
15.5 |
1.34 |
0.57 |
1.4 |
72 |
0 |
0 |
1 |
4 |
3 |
0 |
0 |
MSE 64 A
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4 |
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1.40 |
1.51 |
15.4 |
0.66 |
-0.13 |
7.6 |
77 |
1 |
1 |
0 |
3 |
1 |
0 |
0 |
MSE 295 C
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5 |
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1.40 |
1.52 |
18.6 |
-0.02 |
-0.23 |
14.8 |
78 |
1 |
2 |
0 |
3 |
1 |
0 |
0 |
MSE 295 C
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6 |
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1.13 |
1.31 |
19.3 |
-3.07 |
-0.48 |
39.7 |
79 |
5 |
5 |
2 |
1 |
2 |
0 |
0 |
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7 |
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1.28 |
1.47 |
21.7 |
-2.24 |
-0.22 |
30.3 |
74 |
5 |
4 |
2 |
2 |
5 |
0 |
0 |
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8 |
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1.27 |
2.53 |
20.1 |
-2.42 |
-0.31 |
30.9 |
76 |
5 |
4 |
3 |
2 |
5 |
0 |
0 |
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9 |
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1.29 |
1.49 |
16.4 |
-1.21 |
-0.23 |
18.8 |
74 |
3 |
1 |
0 |
2 |
1 |
1 |
0 |
MSE 178 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program