 |
PDBsum entry 3mp5
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3mp5 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3mp5
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 pores,
coloured by radius |
|
7 pores,
coloured by radius
|
7 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.38 |
2.40 |
27.2 |
-0.99 |
-0.21 |
6.1 |
76 |
|
2 |
0 |
6 |
2 |
2 |
3 |
0 |
|
|
 |
|
2 |
 |
1.34 |
1.58 |
48.9 |
-1.38 |
-0.49 |
16.6 |
83 |
4 |
2 |
5 |
2 |
0 |
0 |
1 |
|
|
3 |
 |
1.39 |
2.26 |
48.8 |
-1.12 |
-0.20 |
12.6 |
77 |
2 |
2 |
5 |
3 |
3 |
2 |
1 |
|
|
4 |
 |
1.79 |
1.90 |
61.8 |
-1.35 |
-0.42 |
10.8 |
78 |
3 |
2 |
9 |
3 |
3 |
3 |
1 |
|
|
5 |
 |
1.23 |
1.40 |
31.9 |
-0.98 |
-0.37 |
19.1 |
78 |
4 |
1 |
3 |
5 |
0 |
0 |
0 |
|
|
6 |
 |
1.34 |
1.37 |
34.2 |
-0.66 |
0.06 |
12.9 |
75 |
2 |
0 |
3 |
2 |
5 |
1 |
0 |
|
 |
7 |
 |
2.00 |
2.05 |
50.8 |
-1.51 |
-0.35 |
23.3 |
81 |
5 |
6 |
2 |
3 |
1 |
3 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program