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PDBsum entry 3kjs
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Tunnel analysis for: 3kjs calculated with  MOLE 2.0
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PDB id
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3kjs
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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24 tunnels,
coloured by tunnel radius |
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13 tunnels,
coloured by
tunnel radius
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13 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.43 |
1.63 |
58.7 |
-2.09 |
-0.66 |
24.8 |
81 |
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6 |
8 |
3 |
2 |
2 |
1 |
0 |
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2 |
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1.42 |
1.62 |
59.5 |
-2.80 |
-0.67 |
31.2 |
82 |
9 |
5 |
5 |
1 |
2 |
0 |
0 |
SO4 701 A SO4 701 B SO4 701 C SO4 701 D
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3 |
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1.42 |
1.62 |
62.0 |
-1.88 |
-0.44 |
25.9 |
78 |
6 |
7 |
4 |
4 |
4 |
1 |
0 |
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4 |
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1.44 |
1.63 |
62.6 |
-1.63 |
-0.54 |
20.4 |
78 |
7 |
5 |
2 |
4 |
4 |
1 |
0 |
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5 |
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1.42 |
1.62 |
62.7 |
-2.84 |
-0.67 |
31.5 |
83 |
10 |
5 |
5 |
1 |
2 |
0 |
0 |
SO4 701 A SO4 701 B SO4 701 C SO4 701 D
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6 |
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1.43 |
1.63 |
64.1 |
-2.63 |
-0.62 |
29.5 |
82 |
14 |
6 |
5 |
1 |
3 |
0 |
0 |
SO4 701 A SO4 701 B SO4 701 C SO4 701 D
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7 |
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1.43 |
1.63 |
64.6 |
-2.59 |
-0.61 |
28.8 |
83 |
12 |
6 |
5 |
1 |
3 |
0 |
0 |
SO4 701 A SO4 701 B SO4 701 C SO4 701 D
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8 |
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1.42 |
1.61 |
65.5 |
-1.87 |
-0.44 |
26.2 |
80 |
7 |
6 |
6 |
5 |
4 |
0 |
0 |
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9 |
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1.45 |
1.65 |
75.1 |
-2.08 |
-0.63 |
24.8 |
83 |
7 |
8 |
6 |
3 |
3 |
1 |
0 |
SO4 701 D
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10 |
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1.42 |
1.61 |
74.3 |
-2.98 |
-0.63 |
31.3 |
84 |
13 |
8 |
7 |
2 |
2 |
1 |
0 |
SO4 701 A SO4 701 B SO4 701 C SO4 701 D
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11 |
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1.34 |
2.65 |
79.1 |
-3.02 |
-0.59 |
34.2 |
82 |
12 |
8 |
5 |
3 |
3 |
1 |
0 |
SO4 701 A SO4 701 B SO4 701 C SO4 701 D
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12 |
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1.43 |
1.63 |
84.4 |
-2.65 |
-0.62 |
27.3 |
83 |
12 |
7 |
9 |
2 |
4 |
1 |
0 |
SO4 701 A SO4 701 B SO4 701 C SO4 701 D
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13 |
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1.43 |
1.62 |
89.1 |
-2.87 |
-0.59 |
31.4 |
80 |
11 |
9 |
7 |
3 |
4 |
1 |
0 |
SO4 701 A SO4 701 B SO4 701 C SO4 701 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program