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PDBsum entry 3ebs
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Pore analysis for: 3ebs calculated with  MOLE 2.0
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PDB id
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3ebs
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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4.30 |
4.43 |
30.6 |
-2.55 |
-0.30 |
26.7 |
70 |
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7 |
1 |
1 |
0 |
3 |
1 |
0 |
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2 |
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4.50 |
5.19 |
32.9 |
-2.56 |
-0.27 |
27.8 |
72 |
10 |
1 |
1 |
0 |
3 |
0 |
0 |
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3 |
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1.51 |
1.70 |
35.3 |
-0.33 |
0.02 |
18.1 |
80 |
7 |
0 |
0 |
9 |
1 |
0 |
0 |
HEM 500 B
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4 |
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4.34 |
4.45 |
35.8 |
-2.65 |
-0.38 |
28.9 |
74 |
10 |
2 |
1 |
0 |
2 |
1 |
0 |
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5 |
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4.06 |
4.20 |
35.9 |
-2.26 |
-0.28 |
24.1 |
72 |
9 |
2 |
1 |
0 |
3 |
1 |
0 |
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6 |
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4.49 |
4.49 |
37.5 |
-2.96 |
-0.54 |
36.8 |
74 |
9 |
3 |
1 |
0 |
1 |
1 |
0 |
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7 |
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1.38 |
2.22 |
38.3 |
1.97 |
0.70 |
2.3 |
78 |
2 |
1 |
2 |
13 |
5 |
1 |
0 |
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8 |
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1.19 |
1.30 |
41.0 |
-0.64 |
-0.06 |
16.8 |
74 |
5 |
1 |
3 |
5 |
3 |
2 |
0 |
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9 |
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1.18 |
1.30 |
47.6 |
-1.02 |
-0.10 |
22.3 |
73 |
6 |
3 |
2 |
5 |
4 |
1 |
0 |
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10 |
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1.20 |
1.30 |
49.6 |
-1.10 |
-0.13 |
17.5 |
74 |
7 |
2 |
3 |
5 |
4 |
2 |
0 |
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11 |
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1.19 |
1.30 |
53.9 |
-1.26 |
-0.21 |
18.1 |
74 |
9 |
4 |
3 |
5 |
5 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program