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PDBsum entry 3ebs
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Tunnel analysis for: 3ebs calculated with  MOLE 2.0
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PDB id
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3ebs
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.15 |
2.64 |
52.3 |
1.19 |
0.27 |
3.4 |
69 |
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1 |
1 |
2 |
12 |
5 |
0 |
1 |
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N4E 1 D HEM 500 D
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2 |
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1.14 |
2.65 |
78.4 |
-0.93 |
-0.10 |
18.7 |
72 |
8 |
3 |
3 |
9 |
6 |
0 |
1 |
N4E 1 D HEM 500 D
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3 |
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1.36 |
1.62 |
16.4 |
-0.34 |
0.06 |
3.8 |
82 |
1 |
0 |
3 |
2 |
1 |
2 |
0 |
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4 |
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1.37 |
1.62 |
17.2 |
-0.49 |
-0.12 |
3.7 |
82 |
1 |
0 |
3 |
2 |
1 |
2 |
0 |
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5 |
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1.35 |
1.62 |
23.2 |
-0.41 |
-0.16 |
8.7 |
85 |
1 |
1 |
3 |
2 |
1 |
1 |
0 |
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6 |
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1.20 |
1.23 |
16.1 |
-1.80 |
-0.49 |
27.9 |
91 |
2 |
3 |
1 |
3 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program