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PDBsum entry 3ebf

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ebf calculated with MOLE 2.0 PDB id
3ebf
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.85 1.91 40.6 -0.90 -0.05 9.1 75 2 2 5 5 4 0 1  HEM 2901 B 332 2903 B
2 1.87 3.29 43.4 -0.67 -0.05 7.3 77 1 2 6 4 4 0 1  HEM 901 A 332 903 A
3 1.90 2.12 28.7 -2.07 -0.49 24.6 81 4 4 3 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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