PDBsum entry 3dpm Go to PDB code:  Pore analysis for: 3dpm calculated with MOLE 2.0 PDB id 3dpm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.35 2.59 25.9 0.06 -0.05 13.6 77 2 1 0 4 2 1 0   2 1.60 1.83 35.5 -1.48 -0.29 13.9 84 1 1 5 4 2 2 0   3 1.50 1.50 31.5 -1.83 -0.45 12.2 82 1 2 4 2 3 1 0   4 1.19 1.96 27.7 -0.99 0.09 15.3 80 3 2 5 2 3 0 0   5 1.22 1.41 31.2 -1.48 -0.17 17.6 83 4 1 3 2 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.