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PDBsum entry 3dkt
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Tunnel analysis for: 3dkt calculated with  MOLE 2.0
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PDB id
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3dkt
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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26 tunnels,
coloured by tunnel radius |
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26 tunnels,
coloured by
tunnel radius
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26 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
1.24 |
24.1 |
1.87 |
0.55 |
6.0 |
78 |
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2 |
1 |
0 |
10 |
2 |
0 |
0 |
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2 |
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1.23 |
2.88 |
24.7 |
1.78 |
0.59 |
7.2 |
78 |
2 |
1 |
0 |
10 |
2 |
0 |
0 |
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3 |
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1.22 |
2.87 |
24.9 |
1.68 |
0.43 |
7.4 |
82 |
2 |
1 |
0 |
10 |
1 |
0 |
0 |
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4 |
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1.25 |
1.47 |
25.1 |
2.84 |
0.83 |
0.9 |
83 |
0 |
0 |
0 |
11 |
1 |
0 |
0 |
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5 |
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1.23 |
3.40 |
25.2 |
2.87 |
0.87 |
0.9 |
84 |
0 |
0 |
0 |
12 |
1 |
0 |
0 |
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6 |
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1.28 |
1.46 |
26.4 |
2.66 |
0.77 |
2.1 |
84 |
1 |
0 |
0 |
11 |
1 |
0 |
0 |
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7 |
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1.23 |
2.87 |
26.4 |
2.67 |
0.80 |
2.3 |
81 |
1 |
0 |
0 |
12 |
2 |
0 |
0 |
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8 |
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1.22 |
1.55 |
26.6 |
2.72 |
0.82 |
1.9 |
81 |
1 |
0 |
0 |
12 |
2 |
0 |
0 |
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9 |
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1.25 |
3.60 |
26.6 |
2.61 |
0.75 |
2.2 |
85 |
1 |
0 |
0 |
12 |
1 |
0 |
0 |
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10 |
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1.22 |
2.87 |
28.1 |
2.78 |
0.89 |
2.2 |
80 |
1 |
0 |
0 |
11 |
2 |
0 |
0 |
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11 |
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1.24 |
3.47 |
25.5 |
2.19 |
0.64 |
4.0 |
83 |
1 |
1 |
0 |
12 |
1 |
0 |
0 |
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12 |
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1.25 |
3.46 |
28.7 |
2.82 |
0.86 |
0.8 |
86 |
0 |
0 |
0 |
14 |
1 |
0 |
0 |
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13 |
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1.25 |
3.45 |
56.5 |
0.82 |
0.26 |
10.2 |
85 |
2 |
4 |
1 |
17 |
2 |
0 |
0 |
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14 |
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1.23 |
1.53 |
66.2 |
1.25 |
0.37 |
7.7 |
83 |
3 |
2 |
1 |
19 |
2 |
1 |
0 |
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15 |
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1.28 |
1.34 |
16.0 |
-0.99 |
-0.13 |
15.6 |
71 |
2 |
1 |
1 |
3 |
1 |
1 |
0 |
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16 |
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1.46 |
1.93 |
20.8 |
-0.38 |
-0.18 |
18.0 |
76 |
2 |
2 |
2 |
4 |
0 |
0 |
0 |
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17 |
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1.45 |
2.00 |
26.4 |
-0.83 |
-0.37 |
19.3 |
80 |
0 |
5 |
4 |
4 |
0 |
1 |
0 |
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18 |
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1.24 |
1.25 |
21.9 |
1.99 |
0.52 |
5.0 |
80 |
1 |
1 |
0 |
10 |
1 |
0 |
0 |
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19 |
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1.24 |
1.25 |
22.8 |
1.80 |
0.47 |
6.7 |
82 |
2 |
1 |
0 |
10 |
1 |
0 |
0 |
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20 |
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1.27 |
1.46 |
25.2 |
2.78 |
0.81 |
1.0 |
83 |
0 |
0 |
0 |
11 |
1 |
0 |
0 |
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21 |
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1.23 |
2.88 |
26.0 |
2.59 |
0.74 |
2.3 |
84 |
1 |
0 |
0 |
11 |
1 |
0 |
0 |
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22 |
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1.24 |
3.59 |
24.0 |
1.99 |
0.58 |
5.4 |
78 |
2 |
1 |
0 |
10 |
2 |
0 |
0 |
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23 |
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1.17 |
3.39 |
25.2 |
2.07 |
0.58 |
4.2 |
83 |
1 |
1 |
0 |
12 |
1 |
0 |
0 |
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24 |
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1.27 |
1.42 |
26.6 |
2.51 |
0.72 |
1.9 |
80 |
1 |
0 |
0 |
11 |
2 |
0 |
0 |
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25 |
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1.17 |
3.39 |
27.7 |
2.67 |
0.77 |
1.0 |
86 |
0 |
0 |
0 |
14 |
1 |
0 |
0 |
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26 |
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1.20 |
1.48 |
15.1 |
-0.88 |
-0.11 |
13.5 |
73 |
2 |
0 |
1 |
3 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program