PDBsum entry 3d04 Go to PDB code:  Pore analysis for: 3d04 calculated with MOLE 2.0 PDB id 3d04 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 pore, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.09 1.12 39.8 -0.78 -0.04 15.4 81 5 1 1 4 2 2 0  SAK 162 C 2 2.32 4.75 40.6 -3.24 -0.78 20.6 84 0 6 9 0 1 6 0   3 1.20 1.20 46.8 -0.42 0.00 14.0 74 6 1 1 5 4 3 0  CL 160 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.