PDBsum entry 3b8s Go to PDB code:  Pore analysis for: 3b8s calculated with MOLE 2.0 PDB id 3b8s Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.53 42.7 -0.82 -0.01 11.3 64 2 2 2 2 8 0 0   2 1.37 1.53 96.4 -1.20 -0.24 10.3 72 3 3 6 2 9 1 0   3 1.42 2.80 104.3 -1.41 -0.21 13.7 77 5 5 6 3 7 1 0   4 1.65 2.23 45.1 -1.78 -0.62 10.6 88 1 4 4 1 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.