PDBsum entry 3ad8 Go to PDB code:  Tunnel analysis for: 3ad8 calculated with MOLE 2.0 PDB id 3ad8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 1.33 128.1 -0.28 -0.21 9.9 87 11 4 5 16 3 4 0  SO4 2504 A 2 1.36 1.45 15.2 -2.03 -0.17 21.2 61 2 2 0 0 3 0 0   3 1.11 1.27 23.7 0.38 0.07 11.8 77 2 1 0 7 1 0 0   4 1.13 1.29 29.3 0.16 -0.06 11.7 77 1 1 1 6 1 0 0   5 1.07 1.37 24.7 -2.80 -0.55 12.6 85 1 1 6 1 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.