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PDBsum entry 2y03

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2y03 calculated with MOLE 2.0 PDB id
2y03
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.65 2.65 36.3 3.34 1.30 5.0 89 0 2 0 16 1 0 2  Y01 401 A Y01 401 B 2CV 503 B
2 1.36 1.72 38.3 -0.57 -0.06 12.2 76 2 4 4 2 4 0 2  5FW 601 B
3 1.65 2.16 39.2 2.73 1.11 4.0 85 0 1 0 18 3 1 1  Y01 401 A 2CV 501 B 2CV 503 B
4 1.67 2.95 40.4 2.68 1.14 3.1 83 0 2 0 13 2 1 2  Y01 401 A Y01 401 B 2CV 501 B
5 1.62 2.00 48.0 0.56 0.46 7.2 81 2 1 1 9 4 0 1  2CV 501 A 2CV 503 A Y01 401 B
6 1.40 1.92 52.7 0.27 0.23 7.7 81 1 4 6 8 8 1 0  2CV 501 B 5FW 601 B
7 1.63 2.93 55.5 1.91 0.98 0.9 76 0 0 0 14 6 2 1  2CV 501 A 2CV 501 B
8 1.67 2.94 57.5 2.44 1.10 2.4 84 0 1 0 19 4 1 2  Y01 401 A 2CV 501 A Y01 401 B
9 1.63 1.96 72.1 -0.77 0.03 18.6 81 3 5 3 9 4 0 1  2CV 501 A 5FW 601 A Y01 401 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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