PDBsum entry 2y03 Go to PDB code:  Tunnel analysis for: 2y03 calculated with MOLE 2.0 PDB id 2y03 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 14 tunnels, coloured by tunnel radius 14 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 2.31 30.5 1.23 0.54 6.5 70 0 2 2 5 8 0 0  5FW 601 B 2 1.24 2.70 34.1 0.84 0.41 8.3 70 1 2 3 3 8 0 2  5FW 601 B 3 1.24 2.34 38.5 1.43 0.53 1.5 78 0 1 2 8 6 1 1  2CV 501 B 5FW 601 B 4 1.25 2.40 48.0 2.88 0.98 3.8 84 0 1 2 16 5 0 1  Y01 401 A 2CV 501 B 5FW 601 B 5 1.25 2.39 49.8 3.17 1.11 2.6 84 0 1 2 16 5 0 1  Y01 401 A Y01 401 B 2CV 501 B 5FW 601 B 6 1.23 1.89 53.6 2.28 0.85 1.6 79 0 1 2 13 6 1 1  2CV 501 A 2CV 501 B 5FW 601 B 7 1.29 1.87 75.7 1.61 0.48 4.1 80 1 2 7 12 9 0 2  2CV 501 A 5FW 601 A Y01 401 B 2CV 501 B 5FW 601 B 8 1.17 1.66 19.8 0.23 0.06 8.6 79 2 1 2 4 2 1 0   9 1.18 1.69 29.9 -0.05 0.01 10.8 81 1 2 3 5 3 1 0   10 1.20 1.74 33.7 0.03 0.05 11.5 79 2 1 3 6 3 1 0   11 2.03 4.43 15.7 -0.19 0.06 10.0 84 1 2 2 4 2 0 0   12 1.44 2.11 16.5 -0.10 -0.05 10.0 84 1 2 2 4 2 0 0   13 2.09 4.45 19.0 -0.07 0.13 8.6 79 2 1 2 4 2 1 0   14 1.43 2.05 19.8 -0.01 0.02 8.5 79 2 1 2 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.