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PDBsum entry 2www

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2www calculated with MOLE 2.0 PDB id
2www
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.64 1.64 30.8 -1.65 -0.23 13.4 83 5 2 5 5 1 0 0  
2 1.18 1.31 34.9 -0.77 -0.17 15.4 72 4 2 2 3 2 2 0  2PE 500 D
3 1.49 1.53 48.4 -1.55 -0.33 23.9 83 5 3 2 5 1 1 0  
4 1.17 2.06 50.0 -0.50 -0.02 17.7 79 3 3 2 6 2 1 0  2PE 500 D
5 3.03 3.78 52.5 -2.87 -0.77 28.4 91 5 3 6 1 0 0 0  
6 1.48 1.52 89.5 -2.01 -0.33 27.2 79 9 4 3 7 1 2 0  
7 1.18 1.30 94.7 -1.46 -0.14 24.8 76 7 4 3 8 2 2 0  2PE 500 D
8 1.06 2.11 82.5 -0.87 0.04 20.5 72 6 6 3 9 1 2 0  
9 1.26 2.09 33.3 -0.71 -0.09 16.3 73 5 3 1 4 2 1 0  
10 1.27 1.37 34.6 -0.60 -0.09 14.5 74 5 3 2 3 2 2 0  
11 1.06 2.35 39.8 -0.51 0.19 12.9 75 4 2 4 6 1 1 0  
12 1.02 2.30 44.0 -1.01 0.01 14.2 77 4 3 5 7 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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