spacer
spacer

PDBsum entry 2wn9

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2wn9 calculated with MOLE 2.0 PDB id
2wn9
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.41 21.4 0.63 0.36 7.2 73 1 1 1 4 3 2 1  ZY5 301 E
2 1.22 1.42 25.7 0.36 0.35 3.2 74 0 1 4 2 4 1 2  ZY5 301 E
3 1.23 1.48 28.7 -0.47 0.29 7.5 69 1 0 3 3 6 1 2  ZY5 301 E
4 1.15 1.15 30.8 0.06 -0.27 2.0 90 0 0 4 6 1 1 0  
5 1.43 2.38 19.2 -0.80 -0.38 6.0 78 0 1 3 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer