PDBsum entry 2wn9

Pore analysis for: 2wn9 calculated with

MOLE 2.0

PDB id

2wn9

Pores calculated on whole structure

Pores calculated excluding ligands

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16 pores, coloured by radius

15 pores, coloured by radius

15 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.76

1.99

28.6

-1.88

-0.66

23.8

81

4

4

1

1

2

1

0

2

1.90

3.49

29.8

-0.11

0.36

9.7

74

2

1

2

5

6

1

2

ZY5 301 E

3

1.55

1.74

30.2

-1.24

-0.60

7.3

81

2

1

4

2

1

1

0

4

1.30

1.28

48.9

-0.97

-0.48

7.9

83

3

2

4

5

3

2

0

5

3.62

6.81

53.9

-2.91

-0.66

20.2

79

8

0

8

3

1

4

0

6

1.19

1.19

56.3

-0.88

-0.29

13.6

76

5

5

2

2

4

1

2

7

1.29

1.30

56.3

-0.62

-0.26

10.4

80

2

3

5

4

4

0

0

8

1.84

1.90

57.9

-0.28

-0.27

7.5

86

0

2

5

6

2

1

0

9

1.35

1.35

58.7

-0.86

-0.38

11.5

77

3

3

5

4

5

1

0

10

1.34

1.33

72.6

-2.16

-0.52

16.6

78

11

2

8

3

3

3

0

11

1.98

2.18

81.5

-2.27

-0.62

16.8

80

10

1

11

4

3

3

0

12

1.25

1.25

92.0

-2.01

-0.53

13.9

80

11

2

9

6

3

4

0

13

1.55

1.52

109.2

-0.59

0.05

10.3

77

5

4

5

6

8

2

2

NAG 401 B ZY5 301 C

14

1.39

1.37

127.4

-0.65

-0.31

9.2

81

6

6

6

10

6

4

2

15

1.55

1.52

184.7

-1.42

-0.45

10.2

79

8

8

16

10

9

8

2

ZY5 301 D

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.