PDBsum entry 2vyv Go to PDB code:  Pore analysis for: 2vyv calculated with MOLE 2.0 PDB id 2vyv Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.66 1.66 28.7 -1.27 -0.38 11.5 87 3 2 3 1 2 1 0  CSD 148 C CSD 287 C NAD 1332 C 2 1.93 2.16 61.4 -2.21 -0.63 29.2 85 3 3 2 2 0 0 0   3 2.08 2.51 75.1 -1.42 -0.73 6.6 83 4 2 11 1 2 5 0  FMT 1339 D 4 1.33 1.49 79.6 -1.61 -0.53 19.7 84 9 3 3 4 3 1 0  FMT 1331 A CSD 148 B CSD 287 B FMT 1331 B NAD 1334 B 5 1.32 1.47 115.6 -1.33 -0.41 20.4 82 15 4 3 8 3 0 0  FMT 1331 A CSD 148 B CSD 287 B FMT 1331 B NAD 1334 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.