PDBsum entry 2vyv Go to PDB code:  Tunnel analysis for: 2vyv calculated with MOLE 2.0 PDB id 2vyv Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.45 1.66 38.8 -1.34 -0.71 5.2 90 2 0 5 1 0 3 0   2 1.45 1.66 39.6 -1.29 -0.71 4.7 89 2 1 5 1 0 3 0  FMT 1331 B 3 1.47 1.48 41.2 -1.14 -0.74 4.6 90 1 1 6 2 1 2 0  FMT 1339 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.